Le Thu, Apr 17, 2025 at 01:37:01PM +0800, liwenjun a �crit :
I founded a commit on the upstream for fixing this problem:
Bioconductor Code: groHMM <https://code.bioconductor.org/browse/groHMM/commit/261791bdd2802badced2ba6dc1f0bdddd07a85df>
Or you might prefer to upgrade the major version to their lastest release 1.42.0.
Thanks liwenjun,
can you propose a patch based on the upstream commit? Do you have write access to our Salsa repositories?
I figured out that we can not directly use the new version because our toolchain detects it belongs to BioC 3.21 and intentionally adds a virtual dependency that prevents the package from co-existing with BioC 3.20 packages. It's easy to workaround with a patch, but in that case patching the current version in Debian is as easy and more conservative.
Cheers,
Charles
--
Charles Plessy Nagahama, Yomitan, Okinawa, Japan
Debian Med packaging team
http://www.debian.org/devel/debian-med Tooting from home
https://framapiaf.org/@charles_plessy
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