• Bug#1100273: marked as done (python-mne: FTBFS: failing tests) (2/2)

    From Debian Bug Tracking System@21:1/5 to All on Sun Apr 6 20:10:02 2025
    [continued from previous message]

    SKIPPED [1] mne/tests/test_source_estimate.py:659: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:668: Requires testing dataset SKIPPED [4] mne/tests/test_source_estimate.py:682: Requires testing dataset SKIPPED [6] mne/tests/test_source_estimate.py:844: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1043: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1173: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1211: could not import 'pandas': No module named 'pandas'
    SKIPPED [3] mne/tests/test_source_estimate.py:1235: could not import 'pandas': No module named 'pandas'
    SKIPPED [1] mne/tests/test_source_estimate.py:1305: Requires testing dataset SKIPPED [16] mne/tests/test_source_estimate.py:1344: could not import 'h5io': No module named 'h5io'
    SKIPPED [1] mne/tests/test_source_estimate.py:1472: Requires testing dataset SKIPPED [3] mne/tests/test_source_estimate.py:1527: Requires testing dataset SKIPPED [3] mne/tests/test_source_estimate.py:1536: Requires testing dataset SKIPPED [3] mne/tests/test_source_estimate.py:1545: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1568: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1599: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1618: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1645: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1666: Requires testing dataset SKIPPED [1] mne/tests/test_source_estimate.py:1780: Requires testing dataset SKIPPED [6] mne/tests/test_source_estimate.py:1821: Requires testing dataset SKIPPED [2] mne/tests/test_source_estimate.py:2005: Requires testing dataset SKIPPED [1] mne/tests/test_surface.py:79: Requires testing dataset
    SKIPPED [1] mne/tests/test_surface.py:126: Requires testing dataset
    SKIPPED [1] mne/tests/test_surface.py:158: Requires testing dataset
    SKIPPED [3] mne/tests/test_surface.py:173: could not import 'pyvista': No module named 'pyvista'
    SKIPPED [1] mne/tests/test_surface.py:196: Requires Freesurfer command: mris_sphere
    SKIPPED [3] mne/tests/test_surface.py:214: Requires testing dataset
    SKIPPED [24] mne/tests/test_surface.py:254: could not import 'pyvista': No module named 'pyvista'
    SKIPPED [1] mne/tests/test_surface.py:284: Requires testing dataset
    SKIPPED [4] mne/tests/test_surface.py:336: Requires testing dataset
    SKIPPED [1] mne/tests/test_transforms.py:93: Requires testing dataset
    SKIPPED [1] mne/tests/test_transforms.py:102: Requires testing dataset
    SKIPPED [1] mne/tests/test_transforms.py:301: Requires testing dataset
    SKIPPED [2] mne/tests/test_transforms.py:422: Requires testing dataset
    SKIPPED [1] mne/tests/test_transforms.py:573: Requires testing dataset
    SKIPPED [1] mne/time_frequency/tests/test_ar.py:20: could not import 'patsy': No module named 'patsy'
    SKIPPED [1] mne/time_frequency/tests/test_csd.py:250: could not import 'h5io': No module named 'h5io'
    SKIPPED [1] mne/time_frequency/tests/test_multitaper.py:16: could not import 'nitime': No module named 'nitime'
    SKIPPED [6] mne/time_frequency/tests/test_multitaper.py:41: could not import 'nitime': No module named 'nitime'
    SKIPPED [6] mne/time_frequency/tests/test_spectrum.py:306: could not import 'pandas': No module named 'pandas'
    SKIPPED [3] mne/time_frequency/tests/test_tfr.py:611: could not import 'h5io': No module named 'h5io'
    SKIPPED [1] mne/time_frequency/tests/test_tfr.py:674: could not import 'h5io': No module named 'h5io'
    SKIPPED [2] mne/time_frequency/tests/test_tfr.py:1224: could not import 'pandas': No module named 'pandas'
    SKIPPED [1] mne/time_frequency/tests/test_tfr.py:1252: could not import 'pandas': No module named 'pandas'
    SKIPPED [5] mne/time_frequency/tests/test_tfr.py:1342: could not import 'pandas': No module named 'pandas'
    SKIPPED [3] mne/time_frequency/tests/test_tfr.py:1379: could not import 'pandas': No module named 'pandas'
    SKIPPED [12] mne/time_frequency/tests/test_tfr.py:1422: could not import 'h5io': No module named 'h5io'
    SKIPPED [1] mne/utils/tests/test_check.py:49: Requires testing dataset
    SKIPPED [6] mne/utils/tests/test_check.py:79: Requires testing dataset
    SKIPPED [1] mne/utils/tests/test_check.py:129: Requires testing dataset
    SKIPPED [1] mne/utils/tests/test_check.py:240: Requires testing dataset
    SKIPPED [1] mne/utils/tests/test_check.py:283: Requires testing dataset
    SKIPPED [1] mne/utils/tests/test_check.py:366: Requires testing dataset
    SKIPPED [1] mne/utils/tests/test_config.py:138: could not import 'mne_qt_browser': No module named 'mne_qt_browser'
    SKIPPED [1] mne/utils/tests/test_config.py:173: MNE_SKIP_NETWORK_TESTS is set SKIPPED [1] mne/utils/tests/test_mixin.py:15: Requires testing dataset
    SKIPPED [16] mne/utils/tests/test_numerics.py:554: Numba not installed
    SKIPPED [1] mne/viz/_brain/tests/test_brain.py:122: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/_brain/tests/test_brain.py:167: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:174: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:181: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:190: Requires testing dataset SKIPPED [7] mne/viz/_brain/tests/test_brain.py:549: Requires testing dataset SKIPPED [2] mne/viz/_brain/tests/test_brain.py:680: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/_brain/tests/test_brain.py:712: Test skipped, requires pyvista.
    SKIPPED [2] mne/viz/_brain/tests/test_brain.py:746: Requires testing dataset SKIPPED [2] mne/viz/_brain/tests/test_brain.py:770: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:849: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/_brain/tests/test_brain.py:883: Requires testing dataset SKIPPED [16] mne/viz/_brain/tests/test_brain.py:971: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:1209: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:1253: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_brain.py:1390: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/_brain/tests/test_brain.py:1497: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/_brain/tests/test_notebook.py:13: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_notebook.py:41: Requires testing dataset SKIPPED [1] mne/viz/_brain/tests/test_notebook.py:133: Requires testing dataset SKIPPED [1] mne/viz/backends/tests/test_abstract.py:109: requires pyvistaqt SKIPPED [1] mne/viz/backends/tests/test_abstract.py:117: Skipping Notebook test: No module named 'nbformat'
    SKIPPED [1] mne/viz/backends/tests/test_renderer.py:19: requires pyvistaqt SKIPPED [1] mne/viz/backends/tests/test_renderer.py:41: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/backends/tests/test_renderer.py:61: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/backends/tests/test_renderer.py:177: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/backends/tests/test_renderer.py:185: Test skipped, requires pyvista.
    SKIPPED [1] mne/viz/backends/tests/test_renderer.py:217: Test skipped, requires pyvista.
    SKIPPED [3] mne/viz/backends/tests/test_utils.py:53: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_3d.py:122: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:177: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:219: Requires testing dataset
    SKIPPED [12] mne/viz/tests/test_3d.py:268: Requires testing dataset
    SKIPPED [4] mne/viz/tests/test_3d.py:423: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:476: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:877: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:903: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:1033: Requires testing dataset
    SKIPPED [2] mne/viz/tests/test_3d.py:1090: Requires testing dataset
    SKIPPED [3] mne/viz/tests/test_3d.py:1122: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:1157: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:1174: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:1332: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d.py:1360: Requires testing dataset
    SKIPPED [4] mne/viz/tests/test_3d_mpl.py:35: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d_mpl.py:111: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_3d_mpl.py:156: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_epochs.py:18: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:27: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [3] mne/viz/tests/test_epochs.py:75: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:83: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:97: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:111: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:160: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [4] mne/viz/tests/test_epochs.py:215: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:260: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_epochs.py:423: Requires testing dataset
    SKIPPED [2] mne/viz/tests/test_epochs.py:430: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_epochs.py:485: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_epochs.py:504: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_evoked.py:608: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_ica.py:264: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_ica.py:480: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_misc.py:139: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_misc.py:276: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_misc.py:299: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_misc.py:308: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_misc.py:329: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_proj.py:17: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_raw.py:271: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:298: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:400: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:438: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:473: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:501: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:543: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:638: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [2] mne/viz/tests/test_raw.py:656: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:691: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:704: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [2] mne/viz/tests/test_raw.py:713: Requires testing dataset
    SKIPPED [2] mne/viz/tests/test_raw.py:723: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_raw.py:731: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:741: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [3] mne/viz/tests/test_raw.py:784: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [4] mne/viz/tests/test_raw.py:841: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:873: The MPL backend does not support draggable annotations.
    SKIPPED [1] mne/viz/tests/test_raw.py:865: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [2] mne/viz/tests/test_raw.py:948: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [2] mne/viz/tests/test_raw.py:1158: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:1172: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [3] mne/viz/tests/test_raw.py:1178: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:1199: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:1211: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_raw.py:1223: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_scraper.py:12: Qt API None has version None but pyqtgraph needs >= 5.12!
    SKIPPED [1] mne/viz/tests/test_topomap.py:135: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_topomap.py:683: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_topomap.py:756: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_topomap.py:762: Requires testing dataset
    SKIPPED [1] mne/viz/tests/test_ui_events.py:35: Requires testing dataset
    ===== 2 failed, 2490 passed, 2227 skipped, 6 xfailed in 511.91s (0:08:31) ======
    make[1]: *** [debian/rules:23: override_dh_auto_test] Error 1
    make[1]: Leaving directory '/<<PKGBUILDDIR>>'
    make: *** [debian/rules:14: binary] Error 2
    dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 --------------------------------------------------------------------------------

    The above is just how the build ends and not necessarily the most relevant part.
    If required, the full build log is available here:

    https://people.debian.org/~sanvila/build-logs/202503/

    About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages.

    If you could not reproduce the bug please contact me privately, as I
    am willing to provide ssh access to a virtual machine where the bug is
    fully reproducible.

    If this is really a bug in one of the build-depends, please use
    reassign and add an affects on src:python-mne, so that this is still
    visible in the BTS web page for this package.

    Thanks.

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    id 1u1UPn-00Eb7h-EW; Sun, 06 Apr 2025 18:08:15 +0000
    From: Debian FTP Masters <[email protected]>
    Reply-To: =?utf-8?q?=C3=89tienne_Mollier?= <[email protected]>
    To: [email protected]
    X-DAK: dak process-upload
    X-Debian: DAK
    X-Debian-Package: python-mne
    Debian: DAK
    Debian-Changes: python-mne_1.9.0-2_source.changes
    Debian-Source: python-mne
    Debian-Version: 1.9.0-2
    Debian-Architecture: source
    Debian-Suite: unstable
    Debian-Archive-Action: accept
    MIME-Version: 1.0
    Subject: Bug#1100273: fixed in python-mne 1.9.0-2
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    Date: Sun, 06 Apr 2025 18:08:15 +0000

    --===============3728500606062914168==
    Content-Type: text/plain; charset="utf-8"
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    Source: python-mne
    Source-Version: 1.9.0-2
    Done: Étienne Mollier <[email protected]>

    We believe that the bug you reported is fixed in the latest version of python-mne, which is due to be installed in the Debian FTP archive.

    A summary of the changes between this version and the previous one is
    attached.

    Thank you for reporting the bug, which will now be closed. If you
    have further comments please address them to [email protected],
    and the maintainer will reopen the bug report if appropriate.

    Debian distribution maintenance software
    pp.
    Étienne Mollier <[email protected]> (supplier of updated python-mne package)

    (This message was generated automatically at their request; if you
    believe that there is a problem with it please contact the archive administrators by mailing [email protected])


    -----BEGIN PGP SIGNED MESSAGE-----
    Hash: SHA512

    Format: 1.8
    Date: Sun, 06 Apr 2025 17:54:14 +0200
    Source: python-mne
    Architecture: source
    Version: 1.9.0-2
    Distribution: unstable
    Urgency: medium
    Maintainer: Debian Med Packaging Team <[email protected]>
    Changed-By: Étienne Mollier <[email protected]>
    Closes: 1100273
    Changes:
    python-mne (1.9.0-2) unstable; urgency=medium
    .
    * d/rules: skip test_spherical_conversions and test_tps. (Closes: #1100273)
    * d/control: declare compliance to standards version 4.7.2.
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